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Project pages
This is a selection of projects I participate in.
Molecular Biology Institute
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pygr
Pygr is a project used to develop graph database interfaces in Python, with an emphasis on bioinformatics applications ranging from genome-wide analysis of alternative splicing patterns, to comparative genomics queries of multi-genome alignment data.
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ASAP II
Alternative splicing annotation project
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HIV Positive selection
UCLA HIV POSITIVE SELECTION MUTATION DATABASE
Positive selection analysis of 50,000 HIV-1 subtype B samples from the U.S. identifying mutations that contribute to drug resistance or viral fitness in HIV protease and reverse transcriptase
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VEEDB
Vertebrate Exon Evolution Database
The link will become functional upon publication.
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